Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Gm12899-201ENSMUST00000120565 551 ntBASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Gm23771-201ENSMUST00000178702 110 ntBASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Gm8956-201ENSMUST00000203939 825 ntBASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Gm8492-201ENSMUST00000182375 987 ntBASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Gm5705-201ENSMUST00000066241 711 ntBASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx55Q6ZPL9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gm13263-201ENSMUST00000121271 838 ntBASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gm6407-201ENSMUST00000176468 549 ntBASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Mir8115-201ENSMUST00000184992 119 ntBASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gm27910-201ENSMUST00000185004 107 ntBASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gm37299-201ENSMUST00000193951 826 ntBASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Gm26035-201ENSMUST00000083065 308 ntBASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Ddx55Q6ZPL9 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms