Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd1Q6PIP5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.54□□□□□ -0.4
Nudcd1Q6PIP5 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Gm2260-201ENSMUST00000184965 657 ntBASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Rprl1-202ENSMUST00000198476 238 ntBASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.53□□□□□ -0.4
Nudcd1Q6PIP5 Gm44651-201ENSMUST00000207343 372 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms