Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Gm18367-201ENSMUST00000176139 600 ntBASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup98Q6PFD9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Gm12899-201ENSMUST00000120565 551 ntBASIC14.38□□□□□ -0.11
Nup98Q6PFD9 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Gm21092-201ENSMUST00000178995 955 ntBASIC14.38□□□□□ -0.11
Nup98Q6PFD9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Gm22138-201ENSMUST00000158748 128 ntBASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Gm8815-201ENSMUST00000173809 620 ntBASIC14.38□□□□□ -0.11
Nup98Q6PFD9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.38□□□□□ -0.11
Nup98Q6PFD9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup98Q6PFD9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.37□□□□□ -0.11
Nup98Q6PFD9 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Gm19287-201ENSMUST00000203190 358 ntBASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.37□□□□□ -0.11
Nup98Q6PFD9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms