Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm8199-201ENSMUST00000121323 823 ntBASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm23119-201ENSMUST00000158610 140 ntBASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm27530-201ENSMUST00000184096 98 ntBASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Snrnp40Q6PE01 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Rubie-203ENSMUST00000227803 2430 ntBASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Gm8343-201ENSMUST00000182705 994 ntBASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms