Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.26□□□□□ -0.29
ShbQ6PD21 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.25□□□□□ -0.29
ShbQ6PD21 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ShbQ6PD21 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.25□□□□□ -0.29
ShbQ6PD21 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ShbQ6PD21 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.25□□□□□ -0.29
ShbQ6PD21 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ShbQ6PD21 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Gm13019-201ENSMUST00000120000 276 ntBASIC13.25□□□□□ -0.29
ShbQ6PD21 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.25□□□□□ -0.29
ShbQ6PD21 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.25□□□□□ -0.29
ShbQ6PD21 Gm37981-201ENSMUST00000194280 535 ntBASIC13.25□□□□□ -0.29
ShbQ6PD21 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
ShbQ6PD21 Gm43752-201ENSMUST00000198475 697 ntBASIC13.25□□□□□ -0.29
ShbQ6PD21 Gm44315-201ENSMUST00000203041 219 ntBASIC13.25□□□□□ -0.29
ShbQ6PD21 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ShbQ6PD21 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
ShbQ6PD21 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
ShbQ6PD21 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShbQ6PD21 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.24□□□□□ -0.29
ShbQ6PD21 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.24□□□□□ -0.29
ShbQ6PD21 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.24□□□□□ -0.29
ShbQ6PD21 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.24□□□□□ -0.29
ShbQ6PD21 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.24□□□□□ -0.29
ShbQ6PD21 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
ShbQ6PD21 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShbQ6PD21 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ShbQ6PD21 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShbQ6PD21 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.23□□□□□ -0.29
ShbQ6PD21 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShbQ6PD21 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.23□□□□□ -0.29
ShbQ6PD21 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.23□□□□□ -0.29
ShbQ6PD21 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.23□□□□□ -0.29
ShbQ6PD21 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.23□□□□□ -0.29
ShbQ6PD21 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ShbQ6PD21 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShbQ6PD21 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShbQ6PD21 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShbQ6PD21 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShbQ6PD21 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms