Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slx4Q6P1D7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slx4Q6P1D7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Slx4Q6P1D7 Gm11660-201ENSMUST00000120955 412 ntBASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gm7959-201ENSMUST00000221823 1078 ntBASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gm16380-201ENSMUST00000077997 478 ntBASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gm12948-201ENSMUST00000119406 682 ntBASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gm8723-201ENSMUST00000166076 820 ntBASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gm8701-201ENSMUST00000169259 874 ntBASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gm45113-201ENSMUST00000207518 165 ntBASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gm18204-201ENSMUST00000209835 793 ntBASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slx4Q6P1D7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Gm44260-201ENSMUST00000204946 2094 ntBASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Gm4735-201ENSMUST00000138679 1302 ntBASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Gm5855-201ENSMUST00000200240 1305 ntBASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Gm43610-201ENSMUST00000199117 365 ntBASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Olfr584-201ENSMUST00000098210 964 ntBASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slx4Q6P1D7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Gm5380-201ENSMUST00000119296 2136 ntBASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slx4Q6P1D7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms