Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Scn9aQ62205 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.33□□□□□ -0.11
Scn9aQ62205 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn9aQ62205 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scn9aQ62205 Gm18201-201ENSMUST00000174735 875 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 Gm4034-201ENSMUST00000187674 480 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.33□□□□□ -0.12
Scn9aQ62205 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn9aQ62205 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scn9aQ62205 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scn9aQ62205 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 Gm5451-201ENSMUST00000080545 579 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Scn9aQ62205 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scn9aQ62205 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.33□□□□□ -0.12
Scn9aQ62205 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.33□□□□□ -0.12
Scn9aQ62205 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn9aQ62205 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.32□□□□□ -0.12
Scn9aQ62205 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn9aQ62205 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn9aQ62205 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Scn9aQ62205 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Scn9aQ62205 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Gm11660-201ENSMUST00000120955 412 ntBASIC14.32□□□□□ -0.12
Scn9aQ62205 Gm5706-201ENSMUST00000181525 993 ntBASIC14.32□□□□□ -0.12
Scn9aQ62205 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn9aQ62205 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scn9aQ62205 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.32□□□□□ -0.12
Scn9aQ62205 Gm4604-201ENSMUST00000025040 390 ntBASIC14.32□□□□□ -0.12
Scn9aQ62205 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn9aQ62205 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.31□□□□□ -0.12
Scn9aQ62205 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.31□□□□□ -0.12
Scn9aQ62205 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.31□□□□□ -0.12
Scn9aQ62205 Gm12783-201ENSMUST00000121425 397 ntBASIC14.31□□□□□ -0.12
Scn9aQ62205 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn9aQ62205 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.31□□□□□ -0.12
Scn9aQ62205 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.31□□□□□ -0.12
Scn9aQ62205 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn9aQ62205 Gm8894-201ENSMUST00000074642 666 ntBASIC14.31□□□□□ -0.12
Scn9aQ62205 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn9aQ62205 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn9aQ62205 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms