Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Ecm1Q61508 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.69□□□□□ -0.22
Ecm1Q61508 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.69□□□□□ -0.22
Ecm1Q61508 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm28686-201ENSMUST00000187404 609 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm45398-201ENSMUST00000210561 165 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm9797-202ENSMUST00000218003 294 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm5705-201ENSMUST00000066241 711 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.69□□□□□ -0.22
Ecm1Q61508 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.69□□□□□ -0.22
Ecm1Q61508 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Matn2-206ENSMUST00000228570 2798 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.69□□□□□ -0.22
Ecm1Q61508 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ecm1Q61508 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm11663-201ENSMUST00000117888 290 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm9132-201ENSMUST00000210182 832 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.68□□□□□ -0.22
Ecm1Q61508 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Grk6-205ENSMUST00000224653 2976 ntBASIC13.68□□□□□ -0.22
Ecm1Q61508 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ecm1Q61508 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ecm1Q61508 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.67□□□□□ -0.22
Ecm1Q61508 Gm15595-201ENSMUST00000120840 961 ntBASIC13.67□□□□□ -0.22
Ecm1Q61508 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.67□□□□□ -0.22
Ecm1Q61508 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Ecm1Q61508 Gm9463-201ENSMUST00000206707 601 ntBASIC13.67□□□□□ -0.22
Ecm1Q61508 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.67□□□□□ -0.22
Ecm1Q61508 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.67□□□□□ -0.22
Ecm1Q61508 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Ecm1Q61508 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.67□□□□□ -0.22
Ecm1Q61508 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ecm1Q61508 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ecm1Q61508 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ecm1Q61508 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 167.4 ms