Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Paupar-201ENSMUST00000194826 3482 ntBASIC12.13□□□□□ -0.47
Vsx2Q61412 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.12□□□□□ -0.47
Vsx2Q61412 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Gm27501-201ENSMUST00000183599 107 ntBASIC12.12□□□□□ -0.47
Vsx2Q61412 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.12□□□□□ -0.47
Vsx2Q61412 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.12□□□□□ -0.47
Vsx2Q61412 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vsx2Q61412 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vsx2Q61412 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm15198-201ENSMUST00000117283 177 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm14921-201ENSMUST00000118643 908 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm24548-201ENSMUST00000158650 108 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm29396-201ENSMUST00000185659 716 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm38158-201ENSMUST00000194617 339 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Olfr284-202ENSMUST00000206647 966 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.11□□□□□ -0.47
Vsx2Q61412 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vsx2Q61412 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms