Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Six4Q61321 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Six4Q61321 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Six4Q61321 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six4Q61321 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.52□□□□□ -0.41
Six4Q61321 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.51□□□□□ -0.41
Six4Q61321 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Six4Q61321 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Gm24934-201ENSMUST00000103764 111 ntBASIC12.51□□□□□ -0.41
Six4Q61321 Gm22323-201ENSMUST00000103832 109 ntBASIC12.51□□□□□ -0.41
Six4Q61321 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Six4Q61321 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Six4Q61321 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Six4Q61321 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Six4Q61321 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.51□□□□□ -0.41
Six4Q61321 Gm31256-201ENSMUST00000194705 506 ntBASIC12.51□□□□□ -0.41
Six4Q61321 Gm44364-201ENSMUST00000198368 141 ntBASIC12.51□□□□□ -0.41
Six4Q61321 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.51□□□□□ -0.41
Six4Q61321 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Six4Q61321 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Six4Q61321 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.51□□□□□ -0.41
Six4Q61321 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.51□□□□□ -0.41
Six4Q61321 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Six4Q61321 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.51□□□□□ -0.41
Six4Q61321 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Six4Q61321 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.51□□□□□ -0.41
Six4Q61321 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.51□□□□□ -0.41
Six4Q61321 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six4Q61321 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Six4Q61321 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.5□□□□□ -0.41
Six4Q61321 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Six4Q61321 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.5□□□□□ -0.41
Six4Q61321 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Gm13350-201ENSMUST00000120519 479 ntBASIC12.5□□□□□ -0.41
Six4Q61321 Gm15547-201ENSMUST00000122152 333 ntBASIC12.5□□□□□ -0.41
Six4Q61321 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.5□□□□□ -0.41
Six4Q61321 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Six4Q61321 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.5□□□□□ -0.41
Six4Q61321 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.5□□□□□ -0.41
Six4Q61321 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.5□□□□□ -0.41
Six4Q61321 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.5□□□□□ -0.41
Six4Q61321 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.5□□□□□ -0.41
Six4Q61321 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.5□□□□□ -0.41
Six4Q61321 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.5□□□□□ -0.41
Six4Q61321 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.5□□□□□ -0.41
Six4Q61321 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.5□□□□□ -0.41
Six4Q61321 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Six4Q61321 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.5□□□□□ -0.41
Six4Q61321 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Six4Q61321 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Six4Q61321 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Six4Q61321 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms