Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Gm14247-201ENSMUST00000120950 237 ntBASIC10.36□□□□□ -0.75
Hcfc1Q61191 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Gm24844-201ENSMUST00000158679 127 ntBASIC10.36□□□□□ -0.75
Hcfc1Q61191 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.36□□□□□ -0.75
Hcfc1Q61191 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hcfc1Q61191 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.35□□□□□ -0.75
Hcfc1Q61191 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.35□□□□□ -0.75
Hcfc1Q61191 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.35□□□□□ -0.75
Hcfc1Q61191 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.35□□□□□ -0.75
Hcfc1Q61191 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Gm44158-201ENSMUST00000203881 505 ntBASIC10.35□□□□□ -0.75
Hcfc1Q61191 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.35□□□□□ -0.75
Hcfc1Q61191 Gm26035-201ENSMUST00000083065 308 ntBASIC10.35□□□□□ -0.75
Hcfc1Q61191 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hcfc1Q61191 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm11663-201ENSMUST00000117888 290 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm15352-201ENSMUST00000118696 270 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm2553-201ENSMUST00000215986 605 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.34□□□□□ -0.75
Hcfc1Q61191 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hcfc1Q61191 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms