Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Slc6a4Q60857 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Gm14277-201ENSMUST00000121195 360 ntBASIC12.7□□□□□ -0.38
Slc6a4Q60857 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Gm9230-201ENSMUST00000188228 532 ntBASIC12.7□□□□□ -0.38
Slc6a4Q60857 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc6a4Q60857 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.7□□□□□ -0.38
Slc6a4Q60857 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.7□□□□□ -0.38
Slc6a4Q60857 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.7□□□□□ -0.38
Slc6a4Q60857 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a4Q60857 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Slc6a4Q60857 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.69□□□□□ -0.38
Slc6a4Q60857 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Gm24749-201ENSMUST00000157838 343 ntBASIC12.69□□□□□ -0.38
Slc6a4Q60857 Gm16570-201ENSMUST00000161951 436 ntBASIC12.69□□□□□ -0.38
Slc6a4Q60857 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Mir7070-201ENSMUST00000183657 86 ntBASIC12.69□□□□□ -0.38
Slc6a4Q60857 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.69□□□□□ -0.38
Slc6a4Q60857 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.69□□□□□ -0.38
Slc6a4Q60857 Gm8385-201ENSMUST00000058999 643 ntBASIC12.69□□□□□ -0.38
Slc6a4Q60857 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.69□□□□□ -0.38
Slc6a4Q60857 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a4Q60857 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms