Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Ripk1Q60855 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Rmrp-201ENSMUST00000157463 271 ntBASIC11.73□□□□□ -0.53
Ripk1Q60855 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ripk1Q60855 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Gm6222-202ENSMUST00000182143 629 ntBASIC11.73□□□□□ -0.53
Ripk1Q60855 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ripk1Q60855 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ripk1Q60855 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Ripk1Q60855 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.73□□□□□ -0.53
Ripk1Q60855 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.73□□□□□ -0.53
Ripk1Q60855 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Snora73a-201ENSMUST00000082453 205 ntBASIC11.73□□□□□ -0.53
Ripk1Q60855 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ripk1Q60855 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ripk1Q60855 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.72□□□□□ -0.53
Ripk1Q60855 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Ripk1Q60855 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm24231-201ENSMUST00000104315 133 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm12502-201ENSMUST00000120197 444 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm7809-201ENSMUST00000153199 742 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm43433-201ENSMUST00000196573 481 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm44124-201ENSMUST00000204159 472 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ripk1Q60855 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ripk1Q60855 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.72□□□□□ -0.53
Ripk1Q60855 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ripk1Q60855 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.71□□□□□ -0.53
Ripk1Q60855 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Ripk1Q60855 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ripk1Q60855 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ripk1Q60855 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 178.8 ms