Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Col12a1Q60847 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col12a1Q60847 Mir744-201ENSMUST00000103261 100 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm23400-201ENSMUST00000174994 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm26463-201ENSMUST00000175065 101 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm24332-201ENSMUST00000175102 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm25959-201ENSMUST00000175112 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm22475-201ENSMUST00000175169 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm22903-201ENSMUST00000175193 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm25070-201ENSMUST00000175237 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm24159-201ENSMUST00000175264 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm25299-201ENSMUST00000175283 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm23798-201ENSMUST00000175560 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm23802-201ENSMUST00000175565 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm25708-201ENSMUST00000177687 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm24370-201ENSMUST00000178007 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm23049-201ENSMUST00000178068 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm28019-201ENSMUST00000178138 101 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm25571-201ENSMUST00000178322 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm25355-201ENSMUST00000178456 101 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm24975-201ENSMUST00000178492 101 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm23189-201ENSMUST00000178954 102 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm25100-201ENSMUST00000179750 101 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm23064-201ENSMUST00000179866 101 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm38151-201ENSMUST00000195085 289 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Col12a1Q60847 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.94□□□□□ -0.5
Col12a1Q60847 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col12a1Q60847 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col12a1Q60847 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col12a1Q60847 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm13204-201ENSMUST00000120110 821 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm7211-201ENSMUST00000172692 1118 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm12986-201ENSMUST00000119037 967 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col12a1Q60847 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm4868-201ENSMUST00000164138 789 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm9625-201ENSMUST00000180422 955 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm7082-201ENSMUST00000209880 969 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.93□□□□□ -0.5
Col12a1Q60847 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col12a1Q60847 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col12a1Q60847 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.92□□□□□ -0.5
Col12a1Q60847 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.92□□□□□ -0.5
Col12a1Q60847 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms