Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Gm11930-201ENSMUST00000117788 190 ntBASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Gm13570-201ENSMUST00000140763 309 ntBASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.72□□□□□ -0.53
Tnfaip3Q60769 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfaip3Q60769 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Gm17376-201ENSMUST00000166016 84 ntBASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Gm3096-201ENSMUST00000185770 364 ntBASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Gm6082-201ENSMUST00000215204 454 ntBASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Gm39404-201ENSMUST00000216350 313 ntBASIC11.71□□□□□ -0.53
Tnfaip3Q60769 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfaip3Q60769 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfaip3Q60769 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms