Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm12015-201ENSMUST00000117065 843 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm6963-201ENSMUST00000147879 379 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm9630-201ENSMUST00000178304 885 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm19994-201ENSMUST00000217086 586 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm9996-201ENSMUST00000070359 913 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps54Q5SPW0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Gm14644-201ENSMUST00000116671 647 ntBASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.87□□□□□ -0.03
Vps54Q5SPW0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps54Q5SPW0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.86□□□□□ -0.03
Vps54Q5SPW0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms