Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm8410-201ENSMUST00000117225 605 ntBASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm29541-201ENSMUST00000191351 678 ntBASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm44335-201ENSMUST00000196879 141 ntBASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm44297-201ENSMUST00000198304 141 ntBASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm44346-201ENSMUST00000198851 141 ntBASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm7774-201ENSMUST00000200064 533 ntBASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm5312-201ENSMUST00000203728 547 ntBASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Gm6912-201ENSMUST00000117218 544 ntBASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Gm27772-201ENSMUST00000184900 187 ntBASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Gm42599-201ENSMUST00000201308 469 ntBASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Trav3-3Q5R1C3 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3-3Q5R1C3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms