Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Gm27023-201ENSMUST00000182372 285 ntBASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Cog3-203ENSMUST00000227473 4197 ntBASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Gm10076-201ENSMUST00000073238 384 ntBASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gm10434-201ENSMUST00000101158 471 ntBASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gm23931-201ENSMUST00000103842 109 ntBASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gm22018-201ENSMUST00000104357 131 ntBASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rnf20Q5DTM8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf20Q5DTM8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Gm5187-201ENSMUST00000117317 991 ntBASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Gm12058-201ENSMUST00000118614 437 ntBASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Gm23119-201ENSMUST00000158610 140 ntBASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Gm27390-201ENSMUST00000184516 176 ntBASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Gm44882-201ENSMUST00000205702 802 ntBASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf20Q5DTM8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms