Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.21□□□□□ -0.29
Syne3Q4FZC9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Gm42627-201ENSMUST00000197347 224 ntBASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.21□□□□□ -0.29
Syne3Q4FZC9 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.21□□□□□ -0.3
Syne3Q4FZC9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Syne3Q4FZC9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Syne3Q4FZC9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.21□□□□□ -0.3
Syne3Q4FZC9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Syne3Q4FZC9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Syne3Q4FZC9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Gm23931-201ENSMUST00000103842 109 ntBASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Gm8738-201ENSMUST00000172606 329 ntBASIC13.2□□□□□ -0.3
Syne3Q4FZC9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.2□□□□□ -0.3
Syne3Q4FZC9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syne3Q4FZC9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Gm13392-201ENSMUST00000117708 150 ntBASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Gm6023-201ENSMUST00000118217 606 ntBASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Gm3890-201ENSMUST00000182416 207 ntBASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms