Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Acot6-202ENSMUST00000222921 3622 ntBASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Gm14892-201ENSMUST00000117636 267 ntBASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Gm15004-201ENSMUST00000119192 630 ntBASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Gm30671-201ENSMUST00000214898 318 ntBASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Spg11Q3UHA3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Mir432-201ENSMUST00000157230 75 ntBASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gm11957-201ENSMUST00000118304 779 ntBASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gm25554-201ENSMUST00000158075 113 ntBASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Spg11Q3UHA3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms