Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gm16479-201ENSMUST00000121706 932 ntBASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gm17208-201ENSMUST00000168388 535 ntBASIC13.17□□□□□ -0.3
Trim43aQ3TL54 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gm37042-201ENSMUST00000193816 581 ntBASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Gm8598-201ENSMUST00000221184 836 ntBASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim43aQ3TL54 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms