Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.16□□□□□ -0.78
Trim63Q38HM4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Gm12644-201ENSMUST00000119935 606 ntBASIC10.16□□□□□ -0.78
Trim63Q38HM4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.16□□□□□ -0.78
Trim63Q38HM4 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.16□□□□□ -0.78
Trim63Q38HM4 Gm45167-201ENSMUST00000208007 322 ntBASIC10.16□□□□□ -0.78
Trim63Q38HM4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Lrtm1-203ENSMUST00000224760 3060 ntBASIC10.16□□□□□ -0.78
Trim63Q38HM4 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim63Q38HM4 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.16□□□□□ -0.78
Trim63Q38HM4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.15□□□□□ -0.78
Trim63Q38HM4 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.15□□□□□ -0.78
Trim63Q38HM4 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.15□□□□□ -0.78
Trim63Q38HM4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.15□□□□□ -0.78
Trim63Q38HM4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim63Q38HM4 Gm13437-201ENSMUST00000122434 1981 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms