Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm23647-201ENSMUST00000175042 109 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Rn5s-201ENSMUST00000177555 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s108-201ENSMUST00000177575 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s121-201ENSMUST00000177589 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s146-201ENSMUST00000177889 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm22109-201ENSMUST00000177995 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm22291-201ENSMUST00000178027 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s141-201ENSMUST00000178066 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm23284-201ENSMUST00000178069 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s100-201ENSMUST00000178106 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s111-201ENSMUST00000178203 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s105-201ENSMUST00000178499 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s149-201ENSMUST00000178520 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s103-201ENSMUST00000178755 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s123-201ENSMUST00000178804 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s142-201ENSMUST00000178820 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s144-201ENSMUST00000178859 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s139-201ENSMUST00000178975 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s134-201ENSMUST00000178983 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s136-201ENSMUST00000179080 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm25018-201ENSMUST00000179081 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s104-201ENSMUST00000179107 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s113-201ENSMUST00000179143 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s133-201ENSMUST00000179275 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s117-201ENSMUST00000179431 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm25212-201ENSMUST00000179432 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s138-201ENSMUST00000179476 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s122-201ENSMUST00000179500 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s143-201ENSMUST00000179542 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s107-201ENSMUST00000179704 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm26391-201ENSMUST00000179843 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s110-201ENSMUST00000179995 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s128-201ENSMUST00000180096 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 n-R5s124-201ENSMUST00000180334 119 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 AC132384.2-201ENSMUST00000218018 526 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm24089-201ENSMUST00000093696 109 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm14760-201ENSMUST00000121831 999 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm14148-201ENSMUST00000122433 1008 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm13377-201ENSMUST00000137984 683 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 H2-Pb-201ENSMUST00000172731 531 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm43103-201ENSMUST00000199021 802 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 AC116797.2-202ENSMUST00000223587 1017 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm14156-201ENSMUST00000121538 483 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm13394-201ENSMUST00000121658 1000 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm13071-201ENSMUST00000122237 376 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm23555-201ENSMUST00000157815 135 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm16301-201ENSMUST00000161959 295 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm9372-201ENSMUST00000168454 430 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm22616-201ENSMUST00000179783 100 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm9034-201ENSMUST00000182071 1005 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Mir8104-201ENSMUST00000185165 101 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 AC107711.3-201ENSMUST00000228939 1035 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ush2AQ2QI47 Gm17221-201ENSMUST00000163909 481 ntBASIC6.34□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms