Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm5291-201ENSMUST00000201965 899 ntBASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.07□□□□□ -0.64
Chd8Q09XV5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Gm5851-201ENSMUST00000194132 1204 ntBASIC11.07□□□□□ -0.64
Chd8Q09XV5 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd8Q09XV5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm42937-201ENSMUST00000197360 752 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm30671-201ENSMUST00000214898 318 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm18042-201ENSMUST00000219887 790 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Zfp419-201ENSMUST00000173446 916 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm18466-201ENSMUST00000209147 499 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.06□□□□□ -0.64
Chd8Q09XV5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Chd8Q09XV5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms