Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ebf1Q07802 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ebf1Q07802 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ebf1Q07802 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.62□□□□□ -0.39
Ebf1Q07802 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Ebf1Q07802 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf1Q07802 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.62□□□□□ -0.39
Ebf1Q07802 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ebf1Q07802 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.62□□□□□ -0.39
Ebf1Q07802 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Gm8018-201ENSMUST00000173536 789 ntBASIC12.62□□□□□ -0.39
Ebf1Q07802 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.62□□□□□ -0.39
Ebf1Q07802 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.62□□□□□ -0.39
Ebf1Q07802 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.62□□□□□ -0.39
Ebf1Q07802 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ebf1Q07802 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf1Q07802 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.62□□□□□ -0.39
Ebf1Q07802 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ebf1Q07802 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ebf1Q07802 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ebf1Q07802 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.61□□□□□ -0.39
Ebf1Q07802 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Mir874-201ENSMUST00000104769 76 ntBASIC12.61□□□□□ -0.39
Ebf1Q07802 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.61□□□□□ -0.39
Ebf1Q07802 Gm45433-201ENSMUST00000209386 247 ntBASIC12.61□□□□□ -0.39
Ebf1Q07802 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 Mir339-201ENSMUST00000083659 96 ntBASIC12.61□□□□□ -0.39
Ebf1Q07802 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.61□□□□□ -0.39
Ebf1Q07802 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf1Q07802 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf1Q07802 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm12616-201ENSMUST00000118594 382 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm12266-201ENSMUST00000120311 962 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm16296-201ENSMUST00000159905 325 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm12624-201ENSMUST00000177615 382 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm12621-201ENSMUST00000177760 382 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm12615-201ENSMUST00000177970 382 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm12622-201ENSMUST00000177975 382 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm12627-201ENSMUST00000178412 382 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm12625-201ENSMUST00000179122 382 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms