Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox4Q06831 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox4Q06831 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Sox4Q06831 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.22□□□□□ -0.45
Sox4Q06831 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sox4Q06831 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox4Q06831 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Sox4Q06831 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sox4Q06831 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox4Q06831 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox4Q06831 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.22□□□□□ -0.45
Sox4Q06831 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Sox4Q06831 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Sox4Q06831 Gm24136-201ENSMUST00000083374 165 ntBASIC12.22□□□□□ -0.45
Sox4Q06831 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Sox4Q06831 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.22□□□□□ -0.45
Sox4Q06831 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox4Q06831 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox4Q06831 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sox4Q06831 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox4Q06831 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.21□□□□□ -0.45
Sox4Q06831 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Sox4Q06831 Gm11930-201ENSMUST00000117788 190 ntBASIC12.21□□□□□ -0.45
Sox4Q06831 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.21□□□□□ -0.45
Sox4Q06831 Gm23119-201ENSMUST00000158610 140 ntBASIC12.21□□□□□ -0.45
Sox4Q06831 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox4Q06831 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox4Q06831 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox4Q06831 Gm3096-201ENSMUST00000185770 364 ntBASIC12.21□□□□□ -0.45
Sox4Q06831 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox4Q06831 Gm6082-201ENSMUST00000215204 454 ntBASIC12.21□□□□□ -0.45
Sox4Q06831 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.21□□□□□ -0.45
Sox4Q06831 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sox4Q06831 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.21□□□□□ -0.45
Sox4Q06831 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox4Q06831 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sox4Q06831 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.21□□□□□ -0.46
Sox4Q06831 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox4Q06831 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sox4Q06831 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms