Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col10a1Q05306 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.48□□□□□ -0.57
Col10a1Q05306 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.48□□□□□ -0.57
Col10a1Q05306 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col10a1Q05306 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.48□□□□□ -0.57
Col10a1Q05306 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Col10a1Q05306 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col10a1Q05306 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.48□□□□□ -0.57
Col10a1Q05306 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.47□□□□□ -0.57
Col10a1Q05306 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.47□□□□□ -0.57
Col10a1Q05306 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Gm2991-201ENSMUST00000173338 480 ntBASIC11.47□□□□□ -0.57
Col10a1Q05306 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.47□□□□□ -0.57
Col10a1Q05306 Mir8109-201ENSMUST00000184375 117 ntBASIC11.47□□□□□ -0.57
Col10a1Q05306 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Gm39404-201ENSMUST00000216350 313 ntBASIC11.47□□□□□ -0.57
Col10a1Q05306 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.47□□□□□ -0.57
Col10a1Q05306 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.47□□□□□ -0.57
Col10a1Q05306 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col10a1Q05306 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.47□□□□□ -0.57
Col10a1Q05306 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col10a1Q05306 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.46□□□□□ -0.57
Col10a1Q05306 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col10a1Q05306 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Gm27243-201ENSMUST00000183964 521 ntBASIC11.46□□□□□ -0.57
Col10a1Q05306 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.46□□□□□ -0.57
Col10a1Q05306 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.46□□□□□ -0.57
Col10a1Q05306 Gm45331-201ENSMUST00000209868 554 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms