Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC17.24■□□□□ 0.35
Xrn1P97789 CT009536.2-201ENSMUST00000225370 665 ntBASIC17.24■□□□□ 0.35
Xrn1P97789 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Xrn1P97789 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Xrn1P97789 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Xrn1P97789 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Xrn1P97789 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrn1P97789 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Xrn1P97789 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrn1P97789 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrn1P97789 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Xrn1P97789 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrn1P97789 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Xrn1P97789 Gm18983-201ENSMUST00000222884 2729 ntBASIC17.23■□□□□ 0.35
Xrn1P97789 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Xrn1P97789 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC17.23■□□□□ 0.35
Xrn1P97789 Gm18514-201ENSMUST00000218980 436 ntBASIC17.23■□□□□ 0.35
Xrn1P97789 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrn1P97789 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Xrn1P97789 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.23■□□□□ 0.35
Xrn1P97789 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrn1P97789 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrn1P97789 Gm9796-201ENSMUST00000062249 2250 ntBASIC17.23■□□□□ 0.35
Xrn1P97789 AC093022.4-203ENSMUST00000228523 2657 ntBASIC17.23■□□□□ 0.35
Xrn1P97789 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Xrn1P97789 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrn1P97789 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC17.22■□□□□ 0.35
Xrn1P97789 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Xrn1P97789 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Xrn1P97789 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Xrn1P97789 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Gm13549-201ENSMUST00000118339 796 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 Gm12791-201ENSMUST00000120788 655 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 Gm22442-201ENSMUST00000157256 144 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC17.22■□□□□ 0.35
Xrn1P97789 Gm20414-201ENSMUST00000172918 646 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 Gm21778-201ENSMUST00000178779 471 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 Gm43852-201ENSMUST00000202098 917 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC17.22■□□□□ 0.35
Xrn1P97789 Gm7959-201ENSMUST00000221823 1078 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 CT010506.1-201ENSMUST00000223673 349 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 CT573086.4-201ENSMUST00000226729 342 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 Gm5805-201ENSMUST00000072779 456 ntBASIC17.22■□□□□ 0.35
Xrn1P97789 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Xrn1P97789 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Xrn1P97789 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Xrn1P97789 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Gm12218-201ENSMUST00000117666 399 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Gm26134-201ENSMUST00000178484 110 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 Gm5621-201ENSMUST00000187303 640 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 Gm8197-202ENSMUST00000193422 934 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC17.21■□□□□ 0.35
Xrn1P97789 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC17.21■□□□□ 0.35
Xrn1P97789 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Xrn1P97789 Gm25201-201ENSMUST00000083093 170 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Xrn1P97789 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.21■□□□□ 0.35
Xrn1P97789 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.21■□□□□ 0.35
Xrn1P97789 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC17.21■□□□□ 0.35
Xrn1P97789 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC17.21■□□□□ 0.35
Xrn1P97789 Gm9884-201ENSMUST00000194343 1222 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xrn1P97789 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Xrn1P97789 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 Gm40879-201ENSMUST00000220759 612 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 AC165154.1-201ENSMUST00000226661 340 ntBASIC17.21■□□□□ 0.35
Xrn1P97789 Gm6655-201ENSMUST00000201932 1309 ntBASIC17.2■□□□□ 0.34
Xrn1P97789 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Xrn1P97789 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrn1P97789 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms