Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.75□□□□□ -0.69
Nkx3-1P97436 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.75□□□□□ -0.69
Nkx3-1P97436 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm15703-201ENSMUST00000120250 880 ntBASIC10.75□□□□□ -0.69
Nkx3-1P97436 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.75□□□□□ -0.69
Nkx3-1P97436 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm24514-201ENSMUST00000174961 285 ntBASIC10.75□□□□□ -0.69
Nkx3-1P97436 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm5523-201ENSMUST00000180415 997 ntBASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm27627-201ENSMUST00000183644 150 ntBASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm37666-201ENSMUST00000194110 866 ntBASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm44100-201ENSMUST00000204329 436 ntBASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-1P97436 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Gm9230-201ENSMUST00000188228 532 ntBASIC10.74□□□□□ -0.69
Nkx3-1P97436 Gm42937-201ENSMUST00000197360 752 ntBASIC10.74□□□□□ -0.69
Nkx3-1P97436 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.74□□□□□ -0.69
Nkx3-1P97436 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.74□□□□□ -0.69
Nkx3-1P97436 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.74□□□□□ -0.69
Nkx3-1P97436 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-1P97436 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx3-1P97436 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Nkx3-1P97436 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-1P97436 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx3-1P97436 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx3-1P97436 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx3-1P97436 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-1P97436 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-1P97436 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-1P97436 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-1P97436 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.73□□□□□ -0.69
Nkx3-1P97436 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms