Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.54■□□□□ 0.08
Nkx2-3P97334 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Gm6991-201ENSMUST00000218475 1178 ntBASIC15.53■□□□□ 0.08
Nkx2-3P97334 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.53■□□□□ 0.08
Nkx2-3P97334 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.52■□□□□ 0.08
Nkx2-3P97334 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-3P97334 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.52■□□□□ 0.08
Nkx2-3P97334 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Nkx2-3P97334 Gm8365-201ENSMUST00000197334 648 ntBASIC15.52■□□□□ 0.08
Nkx2-3P97334 Gm19324-201ENSMUST00000213229 1169 ntBASIC15.52■□□□□ 0.08
Nkx2-3P97334 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx2-3P97334 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.52■□□□□ 0.08
Nkx2-3P97334 Snora73b-201ENSMUST00000083419 205 ntBASIC15.52■□□□□ 0.08
Nkx2-3P97334 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-3P97334 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-3P97334 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-3P97334 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Nkx2-3P97334 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Nkx2-3P97334 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-3P97334 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx2-3P97334 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.51■□□□□ 0.07
Nkx2-3P97334 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Gm16166-201ENSMUST00000118291 787 ntBASIC15.51■□□□□ 0.07
Nkx2-3P97334 Gm15004-201ENSMUST00000119192 630 ntBASIC15.51■□□□□ 0.07
Nkx2-3P97334 Gm11956-201ENSMUST00000119525 512 ntBASIC15.51■□□□□ 0.07
Nkx2-3P97334 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Gm15782-201ENSMUST00000121073 445 ntBASIC15.51■□□□□ 0.07
Nkx2-3P97334 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Gm23085-201ENSMUST00000157849 293 ntBASIC15.51■□□□□ 0.07
Nkx2-3P97334 Gm2965-201ENSMUST00000198365 343 ntBASIC15.51■□□□□ 0.07
Nkx2-3P97334 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.51■□□□□ 0.07
Nkx2-3P97334 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.51■□□□□ 0.07
Nkx2-3P97334 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Nkx2-3P97334 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx2-3P97334 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms