Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trim43bP86448 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43bP86448 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43bP86448 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim43bP86448 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.79□□□□□ -0.36
Trim43bP86448 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43bP86448 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Gm14350-201ENSMUST00000116642 640 ntBASIC12.79□□□□□ -0.36
Trim43bP86448 Gm1335-201ENSMUST00000121653 386 ntBASIC12.79□□□□□ -0.36
Trim43bP86448 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43bP86448 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43bP86448 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43bP86448 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43bP86448 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim43bP86448 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trim43bP86448 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43bP86448 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim43bP86448 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.78□□□□□ -0.36
Trim43bP86448 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim43bP86448 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim43bP86448 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim43bP86448 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim43bP86448 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim43bP86448 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim43bP86448 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Gm8062-201ENSMUST00000139696 444 ntBASIC12.78□□□□□ -0.36
Trim43bP86448 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim43bP86448 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Trim43bP86448 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.78□□□□□ -0.36
Trim43bP86448 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim43bP86448 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim43bP86448 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.78□□□□□ -0.36
Trim43bP86448 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim43bP86448 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43bP86448 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trim43bP86448 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43bP86448 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim43bP86448 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trim43bP86448 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43bP86448 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.78□□□□□ -0.36
Trim43bP86448 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43bP86448 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43bP86448 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43bP86448 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43bP86448 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim43bP86448 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43bP86448 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms