Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Gm24231-201ENSMUST00000104315 133 ntBASIC12.27□□□□□ -0.45
SgcgP82348 Gm14277-201ENSMUST00000121195 360 ntBASIC12.27□□□□□ -0.45
SgcgP82348 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.27□□□□□ -0.45
SgcgP82348 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SgcgP82348 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.27□□□□□ -0.45
SgcgP82348 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SgcgP82348 Mir7070-201ENSMUST00000183657 86 ntBASIC12.27□□□□□ -0.45
SgcgP82348 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.27□□□□□ -0.45
SgcgP82348 Gm18304-201ENSMUST00000189162 546 ntBASIC12.27□□□□□ -0.45
SgcgP82348 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.27□□□□□ -0.45
SgcgP82348 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.27□□□□□ -0.45
SgcgP82348 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.27□□□□□ -0.45
SgcgP82348 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.27□□□□□ -0.45
SgcgP82348 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.27□□□□□ -0.45
SgcgP82348 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.27□□□□□ -0.45
SgcgP82348 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
SgcgP82348 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SgcgP82348 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
SgcgP82348 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SgcgP82348 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SgcgP82348 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcgP82348 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SgcgP82348 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SgcgP82348 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
SgcgP82348 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SgcgP82348 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
SgcgP82348 Gm11439-201ENSMUST00000118598 409 ntBASIC12.26□□□□□ -0.45
SgcgP82348 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.26□□□□□ -0.45
SgcgP82348 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Gm6963-201ENSMUST00000147879 379 ntBASIC12.26□□□□□ -0.45
SgcgP82348 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.26□□□□□ -0.45
SgcgP82348 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.26□□□□□ -0.45
SgcgP82348 Gm26461-201ENSMUST00000175064 290 ntBASIC12.26□□□□□ -0.45
SgcgP82348 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Gm18212-201ENSMUST00000211678 889 ntBASIC12.26□□□□□ -0.45
SgcgP82348 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SgcgP82348 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.26□□□□□ -0.45
SgcgP82348 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.26□□□□□ -0.45
SgcgP82348 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.26□□□□□ -0.45
SgcgP82348 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SgcgP82348 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SgcgP82348 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
SgcgP82348 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcgP82348 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SgcgP82348 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.25□□□□□ -0.45
SgcgP82348 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcgP82348 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms