Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.36□□□□□ -0.43
Ldb1P70662 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Ldb1P70662 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ldb1P70662 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ldb1P70662 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.35□□□□□ -0.43
Ldb1P70662 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Ldb1P70662 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.35□□□□□ -0.43
Ldb1P70662 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.35□□□□□ -0.43
Ldb1P70662 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.35□□□□□ -0.43
Ldb1P70662 Gm8062-201ENSMUST00000139696 444 ntBASIC12.35□□□□□ -0.43
Ldb1P70662 Gm24548-201ENSMUST00000158650 108 ntBASIC12.35□□□□□ -0.43
Ldb1P70662 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ldb1P70662 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ldb1P70662 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.35□□□□□ -0.43
Ldb1P70662 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.35□□□□□ -0.43
Ldb1P70662 Gm39404-201ENSMUST00000216350 313 ntBASIC12.35□□□□□ -0.43
Ldb1P70662 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.35□□□□□ -0.43
Ldb1P70662 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ldb1P70662 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ldb1P70662 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.35□□□□□ -0.43
Ldb1P70662 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.35□□□□□ -0.43
Ldb1P70662 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.35□□□□□ -0.43
Ldb1P70662 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.35□□□□□ -0.43
Ldb1P70662 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ldb1P70662 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.35□□□□□ -0.43
Ldb1P70662 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.35□□□□□ -0.43
Ldb1P70662 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.35□□□□□ -0.43
Ldb1P70662 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ldb1P70662 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ldb1P70662 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb1P70662 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.34□□□□□ -0.43
Ldb1P70662 Gm27572-201ENSMUST00000183702 255 ntBASIC12.34□□□□□ -0.43
Ldb1P70662 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.34□□□□□ -0.43
Ldb1P70662 Gm38002-201ENSMUST00000193255 180 ntBASIC12.34□□□□□ -0.43
Ldb1P70662 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.34□□□□□ -0.43
Ldb1P70662 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.34□□□□□ -0.43
Ldb1P70662 Gm43133-201ENSMUST00000197472 463 ntBASIC12.34□□□□□ -0.43
Ldb1P70662 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.34□□□□□ -0.43
Ldb1P70662 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.34□□□□□ -0.43
Ldb1P70662 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms