Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Gm15467-201ENSMUST00000120582 445 ntBASIC12.24□□□□□ -0.45
Shox2P70390 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.24□□□□□ -0.45
Shox2P70390 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.24□□□□□ -0.45
Shox2P70390 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Shox2P70390 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.24□□□□□ -0.45
Shox2P70390 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Gm7775-201ENSMUST00000218871 853 ntBASIC12.24□□□□□ -0.45
Shox2P70390 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.24□□□□□ -0.45
Shox2P70390 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.24□□□□□ -0.45
Shox2P70390 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.24□□□□□ -0.45
Shox2P70390 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.24□□□□□ -0.45
Shox2P70390 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Shox2P70390 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.23□□□□□ -0.45
Shox2P70390 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.23□□□□□ -0.45
Shox2P70390 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.23□□□□□ -0.45
Shox2P70390 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.23□□□□□ -0.45
Shox2P70390 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Shox2P70390 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.23□□□□□ -0.45
Shox2P70390 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.23□□□□□ -0.45
Shox2P70390 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Shox2P70390 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.23□□□□□ -0.45
Shox2P70390 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Gm11439-201ENSMUST00000118598 409 ntBASIC12.23□□□□□ -0.45
Shox2P70390 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.23□□□□□ -0.45
Shox2P70390 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.23□□□□□ -0.45
Shox2P70390 Gm21854-201ENSMUST00000179901 471 ntBASIC12.23□□□□□ -0.45
Shox2P70390 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Shox2P70390 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Shox2P70390 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.23□□□□□ -0.45
Shox2P70390 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.23□□□□□ -0.45
Shox2P70390 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Shox2P70390 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shox2P70390 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shox2P70390 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.22□□□□□ -0.45
Shox2P70390 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.22□□□□□ -0.45
Shox2P70390 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.22□□□□□ -0.45
Shox2P70390 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shox2P70390 Gm23363-201ENSMUST00000175024 79 ntBASIC12.22□□□□□ -0.45
Shox2P70390 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.22□□□□□ -0.45
Shox2P70390 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms