Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm16379-201ENSMUST00000161469 348 ntBASIC12.82□□□□□ -0.36
Smad1P70340 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.82□□□□□ -0.36
Smad1P70340 Mir7070-201ENSMUST00000183657 86 ntBASIC12.82□□□□□ -0.36
Smad1P70340 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.82□□□□□ -0.36
Smad1P70340 Gm8762-201ENSMUST00000193486 339 ntBASIC12.82□□□□□ -0.36
Smad1P70340 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.82□□□□□ -0.36
Smad1P70340 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.82□□□□□ -0.36
Smad1P70340 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.82□□□□□ -0.36
Smad1P70340 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Smad1P70340 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smad1P70340 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.82□□□□□ -0.36
Smad1P70340 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Smad1P70340 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smad1P70340 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.82□□□□□ -0.36
Smad1P70340 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smad1P70340 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smad1P70340 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smad1P70340 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.81□□□□□ -0.36
Smad1P70340 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smad1P70340 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.81□□□□□ -0.36
Smad1P70340 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Gm24255-201ENSMUST00000104481 128 ntBASIC12.81□□□□□ -0.36
Smad1P70340 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Smad1P70340 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.81□□□□□ -0.36
Smad1P70340 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.81□□□□□ -0.36
Smad1P70340 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.81□□□□□ -0.36
Smad1P70340 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smad1P70340 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smad1P70340 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.81□□□□□ -0.36
Smad1P70340 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Smad1P70340 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.81□□□□□ -0.36
Smad1P70340 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.81□□□□□ -0.36
Smad1P70340 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smad1P70340 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.8□□□□□ -0.36
Smad1P70340 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smad1P70340 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smad1P70340 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.8□□□□□ -0.36
Smad1P70340 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Smad1P70340 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smad1P70340 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smad1P70340 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smad1P70340 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.8□□□□□ -0.36
Smad1P70340 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.8□□□□□ -0.36
Smad1P70340 Gm26185-201ENSMUST00000157692 266 ntBASIC12.8□□□□□ -0.36
Smad1P70340 Gm17208-201ENSMUST00000168388 535 ntBASIC12.8□□□□□ -0.36
Smad1P70340 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.8□□□□□ -0.36
Smad1P70340 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.8□□□□□ -0.36
Smad1P70340 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.8□□□□□ -0.36
Smad1P70340 Gm8227-201ENSMUST00000223306 571 ntBASIC12.8□□□□□ -0.36
Smad1P70340 Mir339-201ENSMUST00000083659 96 ntBASIC12.8□□□□□ -0.36
Smad1P70340 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smad1P70340 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms