Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra8P70278 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Stra8P70278 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra8P70278 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra8P70278 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra8P70278 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Stra8P70278 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra8P70278 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Stra8P70278 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra8P70278 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Stra8P70278 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC17.14■□□□□ 0.34
Stra8P70278 Gm26684-202ENSMUST00000228229 8257 ntBASIC17.14■□□□□ 0.34
Stra8P70278 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Stra8P70278 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.14■□□□□ 0.33
Stra8P70278 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.14■□□□□ 0.33
Stra8P70278 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Gm37922-201ENSMUST00000195596 455 ntBASIC17.14■□□□□ 0.33
Stra8P70278 Gm18187-201ENSMUST00000196476 984 ntBASIC17.14■□□□□ 0.33
Stra8P70278 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.14■□□□□ 0.33
Stra8P70278 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Stra8P70278 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Stra8P70278 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC17.14■□□□□ 0.33
Stra8P70278 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.14■□□□□ 0.33
Stra8P70278 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra8P70278 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC17.13■□□□□ 0.33
Stra8P70278 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Stra8P70278 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Stra8P70278 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Gm18227-201ENSMUST00000211082 1468 ntBASIC17.13■□□□□ 0.33
Stra8P70278 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stra8P70278 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stra8P70278 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Gm12390-201ENSMUST00000117897 397 ntBASIC17.13■□□□□ 0.33
Stra8P70278 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.13■□□□□ 0.33
Stra8P70278 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.13■□□□□ 0.33
Stra8P70278 Gm27331-201ENSMUST00000183705 60 ntBASIC17.13■□□□□ 0.33
Stra8P70278 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.13■□□□□ 0.33
Stra8P70278 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.13■□□□□ 0.33
Stra8P70278 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Stra8P70278 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Stra8P70278 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stra8P70278 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Stra8P70278 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Stra8P70278 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Stra8P70278 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.12■□□□□ 0.33
Stra8P70278 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.12■□□□□ 0.33
Stra8P70278 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.12■□□□□ 0.33
Stra8P70278 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.12■□□□□ 0.33
Stra8P70278 Gm29705-201ENSMUST00000212598 474 ntBASIC17.12■□□□□ 0.33
Stra8P70278 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Gm10146-201ENSMUST00000072739 309 ntBASIC17.12■□□□□ 0.33
Stra8P70278 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Stra8P70278 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.12■□□□□ 0.33
Stra8P70278 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stra8P70278 CT025678.1-201ENSMUST00000214795 2972 ntBASIC17.12■□□□□ 0.33
Stra8P70278 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms