Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hmgb1P63158 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb1P63158 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmgb1P63158 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmgb1P63158 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.69□□□□□ -0.22
Hmgb1P63158 Gm16177-201ENSMUST00000120728 718 ntBASIC13.69□□□□□ -0.22
Hmgb1P63158 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmgb1P63158 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.69□□□□□ -0.22
Hmgb1P63158 Gm27682-201ENSMUST00000183930 110 ntBASIC13.69□□□□□ -0.22
Hmgb1P63158 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Gm43818-201ENSMUST00000200605 466 ntBASIC13.69□□□□□ -0.22
Hmgb1P63158 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.69□□□□□ -0.22
Hmgb1P63158 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmgb1P63158 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.69□□□□□ -0.22
Hmgb1P63158 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmgb1P63158 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmgb1P63158 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmgb1P63158 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb1P63158 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hmgb1P63158 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hmgb1P63158 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.68□□□□□ -0.22
Hmgb1P63158 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgb1P63158 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.68□□□□□ -0.22
Hmgb1P63158 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Cog3-203ENSMUST00000227473 4197 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.68□□□□□ -0.22
Hmgb1P63158 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Gm1335-201ENSMUST00000121653 386 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Gm29127-201ENSMUST00000188304 517 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Gm42599-201ENSMUST00000201308 469 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 Gm45930-201ENSMUST00000221330 292 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Hmgb1P63158 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgb1P63158 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Pck2-205ENSMUST00000226352 2784 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.68□□□□□ -0.22
Hmgb1P63158 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hmgb1P63158 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Hmgb1P63158 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb1P63158 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms