Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm18052-201ENSMUST00000208750 559 ntBASIC12.21□□□□□ -0.45
Lhx1P63006 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.21□□□□□ -0.45
Lhx1P63006 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.21□□□□□ -0.45
Lhx1P63006 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.21□□□□□ -0.45
Lhx1P63006 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.21□□□□□ -0.45
Lhx1P63006 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.21□□□□□ -0.45
Lhx1P63006 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.21□□□□□ -0.45
Lhx1P63006 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Lhx1P63006 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx1P63006 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx1P63006 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Lhx1P63006 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx1P63006 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx1P63006 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx1P63006 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Lhx1P63006 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Lhx1P63006 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lhx1P63006 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.2□□□□□ -0.46
Lhx1P63006 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.2□□□□□ -0.46
Lhx1P63006 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Lhx1P63006 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Lhx1P63006 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.2□□□□□ -0.46
Lhx1P63006 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.2□□□□□ -0.46
Lhx1P63006 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.2□□□□□ -0.46
Lhx1P63006 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Lhx1P63006 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.2□□□□□ -0.46
Lhx1P63006 Gm29199-201ENSMUST00000187766 775 ntBASIC12.2□□□□□ -0.46
Lhx1P63006 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Gm45598-202ENSMUST00000210719 986 ntBASIC12.2□□□□□ -0.46
Lhx1P63006 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Gm18212-201ENSMUST00000211678 889 ntBASIC12.2□□□□□ -0.46
Lhx1P63006 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.2□□□□□ -0.46
Lhx1P63006 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Lhx1P63006 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Lhx1P63006 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.2□□□□□ -0.46
Lhx1P63006 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.2□□□□□ -0.46
Lhx1P63006 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx1P63006 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lhx1P63006 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lhx1P63006 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.19□□□□□ -0.46
Lhx1P63006 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.19□□□□□ -0.46
Lhx1P63006 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.19□□□□□ -0.46
Lhx1P63006 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.19□□□□□ -0.46
Lhx1P63006 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lhx1P63006 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lhx1P63006 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Gm14017-201ENSMUST00000121934 386 ntBASIC12.19□□□□□ -0.46
Lhx1P63006 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.19□□□□□ -0.46
Lhx1P63006 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.19□□□□□ -0.46
Lhx1P63006 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx1P63006 Gm2383-201ENSMUST00000181461 807 ntBASIC12.19□□□□□ -0.46
Lhx1P63006 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.19□□□□□ -0.46
Lhx1P63006 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.19□□□□□ -0.46
Lhx1P63006 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms