Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sec61a1P61620 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.98□□□□□ -0.65
Sec61a1P61620 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.98□□□□□ -0.65
Sec61a1P61620 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.98□□□□□ -0.65
Sec61a1P61620 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sec61a1P61620 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Sec61a1P61620 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm12957-201ENSMUST00000117835 377 ntBASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm8213-201ENSMUST00000118191 441 ntBASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm27331-201ENSMUST00000183705 60 ntBASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm29705-201ENSMUST00000212598 474 ntBASIC10.97□□□□□ -0.65
Sec61a1P61620 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.97□□□□□ -0.65
Sec61a1P61620 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.97□□□□□ -0.65
Sec61a1P61620 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.97□□□□□ -0.65
Sec61a1P61620 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Sec61a1P61620 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.97□□□□□ -0.65
Sec61a1P61620 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Sec61a1P61620 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a1P61620 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sec61a1P61620 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Sec61a1P61620 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Sec61a1P61620 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.96□□□□□ -0.65
Sec61a1P61620 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Sec61a1P61620 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.96□□□□□ -0.65
Sec61a1P61620 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.96□□□□□ -0.65
Sec61a1P61620 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sec61a1P61620 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Gm6447-201ENSMUST00000118905 835 ntBASIC10.96□□□□□ -0.65
Sec61a1P61620 Gm13369-201ENSMUST00000119442 987 ntBASIC10.96□□□□□ -0.65
Sec61a1P61620 Gm16177-201ENSMUST00000120728 718 ntBASIC10.96□□□□□ -0.65
Sec61a1P61620 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Sec61a1P61620 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sec61a1P61620 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.96□□□□□ -0.65
Sec61a1P61620 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.96□□□□□ -0.65
Sec61a1P61620 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.96□□□□□ -0.65
Sec61a1P61620 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms