Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14□□□□□ -0.17
Rrp1P56183 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14□□□□□ -0.17
Rrp1P56183 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14□□□□□ -0.17
Rrp1P56183 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14□□□□□ -0.17
Rrp1P56183 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14□□□□□ -0.17
Rrp1P56183 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14□□□□□ -0.17
Rrp1P56183 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rrp1P56183 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rrp1P56183 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rrp1P56183 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Gm10339-203ENSMUST00000225409 1671 ntBASIC14□□□□□ -0.17
Rrp1P56183 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14□□□□□ -0.17
Rrp1P56183 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rrp1P56183 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14□□□□□ -0.17
Rrp1P56183 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rrp1P56183 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.99□□□□□ -0.17
Rrp1P56183 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rrp1P56183 Gm14127-201ENSMUST00000117906 678 ntBASIC13.99□□□□□ -0.17
Rrp1P56183 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.99□□□□□ -0.17
Rrp1P56183 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.99□□□□□ -0.17
Rrp1P56183 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.99□□□□□ -0.17
Rrp1P56183 Gm23119-201ENSMUST00000158610 140 ntBASIC13.99□□□□□ -0.17
Rrp1P56183 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Gm7029-201ENSMUST00000173226 450 ntBASIC13.99□□□□□ -0.17
Rrp1P56183 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Rrp1P56183 Gm4271-201ENSMUST00000174444 973 ntBASIC13.99□□□□□ -0.17
Rrp1P56183 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.99□□□□□ -0.17
Rrp1P56183 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.99□□□□□ -0.17
Rrp1P56183 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rrp1P56183 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rrp1P56183 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rrp1P56183 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rrp1P56183 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.98□□□□□ -0.17
Rrp1P56183 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.98□□□□□ -0.17
Rrp1P56183 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Rrp1P56183 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Rrp1P56183 Gm13492-201ENSMUST00000119772 665 ntBASIC13.98□□□□□ -0.17
Rrp1P56183 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.98□□□□□ -0.17
Rrp1P56183 Gm11597-201ENSMUST00000121423 964 ntBASIC13.98□□□□□ -0.17
Rrp1P56183 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.98□□□□□ -0.17
Rrp1P56183 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.98□□□□□ -0.17
Rrp1P56183 Gm6244-201ENSMUST00000178732 841 ntBASIC13.98□□□□□ -0.17
Rrp1P56183 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Gm27892-201ENSMUST00000185017 106 ntBASIC13.98□□□□□ -0.17
Rrp1P56183 Gm4034-201ENSMUST00000187674 480 ntBASIC13.98□□□□□ -0.17
Rrp1P56183 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Rrp1P56183 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.98□□□□□ -0.17
Rrp1P56183 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.98□□□□□ -0.17
Rrp1P56183 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rrp1P56183 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rrp1P56183 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rrp1P56183 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms