Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Cdh11P55288 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.34□□□□□ -0.59
Cdh11P55288 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Gm25927-201ENSMUST00000175058 117 ntBASIC11.34□□□□□ -0.59
Cdh11P55288 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Cdh11P55288 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Gm27514-201ENSMUST00000183692 110 ntBASIC11.34□□□□□ -0.59
Cdh11P55288 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.34□□□□□ -0.59
Cdh11P55288 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.34□□□□□ -0.59
Cdh11P55288 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.34□□□□□ -0.59
Cdh11P55288 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdh11P55288 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdh11P55288 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh11P55288 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh11P55288 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdh11P55288 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdh11P55288 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Cdh11P55288 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdh11P55288 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Cdh11P55288 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cdh11P55288 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh11P55288 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Gm9630-201ENSMUST00000178304 885 ntBASIC11.33□□□□□ -0.6
Cdh11P55288 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Gm27682-201ENSMUST00000183930 110 ntBASIC11.33□□□□□ -0.6
Cdh11P55288 Mir6420-201ENSMUST00000185032 102 ntBASIC11.33□□□□□ -0.6
Cdh11P55288 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdh11P55288 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdh11P55288 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdh11P55288 Gm45880-201ENSMUST00000213041 853 ntBASIC11.33□□□□□ -0.6
Cdh11P55288 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Gm10146-201ENSMUST00000072739 309 ntBASIC11.33□□□□□ -0.6
Cdh11P55288 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh11P55288 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.33□□□□□ -0.6
Cdh11P55288 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdh11P55288 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.33□□□□□ -0.6
Cdh11P55288 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Cdh11P55288 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh11P55288 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh11P55288 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdh11P55288 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh11P55288 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms