Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.88□□□□□ -0.51
Cdkn2bP55271 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gm8018-201ENSMUST00000173536 789 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 Auts2-212ENSMUST00000178555 309 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gm18304-201ENSMUST00000189162 546 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdkn2bP55271 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.87□□□□□ -0.51
Cdkn2bP55271 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.86□□□□□ -0.51
Cdkn2bP55271 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.86□□□□□ -0.51
Cdkn2bP55271 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdkn2bP55271 Gm14928-201ENSMUST00000120198 477 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms