Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Nub1P54729 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nub1P54729 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nub1P54729 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nub1P54729 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Nub1P54729 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nub1P54729 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nub1P54729 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nub1P54729 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Nub1P54729 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nub1P54729 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nub1P54729 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Rmrp-201ENSMUST00000157463 271 ntBASIC13.41□□□□□ -0.26
Nub1P54729 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.41□□□□□ -0.26
Nub1P54729 Gm20614-201ENSMUST00000177106 632 ntBASIC13.41□□□□□ -0.26
Nub1P54729 Gm29396-201ENSMUST00000185659 716 ntBASIC13.41□□□□□ -0.26
Nub1P54729 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.41□□□□□ -0.26
Nub1P54729 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.41□□□□□ -0.26
Nub1P54729 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.41□□□□□ -0.26
Nub1P54729 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.41□□□□□ -0.26
Nub1P54729 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nub1P54729 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nub1P54729 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nub1P54729 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Nub1P54729 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
Nub1P54729 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nub1P54729 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.4□□□□□ -0.26
Nub1P54729 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.4□□□□□ -0.26
Nub1P54729 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nub1P54729 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.4□□□□□ -0.26
Nub1P54729 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.4□□□□□ -0.26
Nub1P54729 Gm19087-201ENSMUST00000191430 946 ntBASIC13.4□□□□□ -0.26
Nub1P54729 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.4□□□□□ -0.26
Nub1P54729 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.4□□□□□ -0.26
Nub1P54729 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Nub1P54729 Gm7046-201ENSMUST00000221351 977 ntBASIC13.4□□□□□ -0.26
Nub1P54729 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 AC107453.4-201ENSMUST00000227068 1817 ntBASIC13.4□□□□□ -0.26
Nub1P54729 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nub1P54729 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.4□□□□□ -0.26
Nub1P54729 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nub1P54729 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nub1P54729 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.39□□□□□ -0.27
Nub1P54729 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Gm9022-201ENSMUST00000182482 992 ntBASIC13.39□□□□□ -0.27
Nub1P54729 Gm27516-201ENSMUST00000184237 98 ntBASIC13.39□□□□□ -0.27
Nub1P54729 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Gm8227-201ENSMUST00000223306 571 ntBASIC13.39□□□□□ -0.27
Nub1P54729 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms