Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Fdft1P53798 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Fdft1P53798 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fdft1P53798 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Fdft1P53798 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.42□□□□□ -0.42
Fdft1P53798 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Fdft1P53798 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Fdft1P53798 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Fdft1P53798 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.42□□□□□ -0.42
Fdft1P53798 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.42□□□□□ -0.42
Fdft1P53798 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.42□□□□□ -0.42
Fdft1P53798 Gm16296-201ENSMUST00000159905 325 ntBASIC12.42□□□□□ -0.42
Fdft1P53798 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.42□□□□□ -0.42
Fdft1P53798 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.42□□□□□ -0.42
Fdft1P53798 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Gm26035-201ENSMUST00000083065 308 ntBASIC12.42□□□□□ -0.42
Fdft1P53798 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.42□□□□□ -0.42
Fdft1P53798 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.42□□□□□ -0.42
Fdft1P53798 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.42□□□□□ -0.42
Fdft1P53798 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Fdft1P53798 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Fdft1P53798 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fdft1P53798 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.41□□□□□ -0.42
Fdft1P53798 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Fdft1P53798 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.41□□□□□ -0.42
Fdft1P53798 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.41□□□□□ -0.42
Fdft1P53798 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Fdft1P53798 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Fdft1P53798 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.41□□□□□ -0.42
Fdft1P53798 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fdft1P53798 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.41□□□□□ -0.42
Fdft1P53798 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.41□□□□□ -0.42
Fdft1P53798 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Gm38092-201ENSMUST00000195600 653 ntBASIC12.41□□□□□ -0.42
Fdft1P53798 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.41□□□□□ -0.42
Fdft1P53798 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.41□□□□□ -0.42
Fdft1P53798 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.41□□□□□ -0.42
Fdft1P53798 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Fdft1P53798 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Fdft1P53798 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Fdft1P53798 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Fdft1P53798 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.41□□□□□ -0.42
Fdft1P53798 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fdft1P53798 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Fdft1P53798 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Fdft1P53798 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fdft1P53798 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.4□□□□□ -0.42
Fdft1P53798 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Fdft1P53798 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms