Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm11930-201ENSMUST00000117788 190 ntBASIC11.94□□□□□ -0.5
Sox3P53784 Gm12208-201ENSMUST00000122004 163 ntBASIC11.94□□□□□ -0.5
Sox3P53784 Gm14665-201ENSMUST00000122294 557 ntBASIC11.94□□□□□ -0.5
Sox3P53784 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.94□□□□□ -0.5
Sox3P53784 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Gm8738-201ENSMUST00000172606 329 ntBASIC11.94□□□□□ -0.5
Sox3P53784 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox3P53784 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Gm9211-201ENSMUST00000182882 975 ntBASIC11.94□□□□□ -0.5
Sox3P53784 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sox3P53784 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.94□□□□□ -0.5
Sox3P53784 Gm45770-201ENSMUST00000212105 616 ntBASIC11.94□□□□□ -0.5
Sox3P53784 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.94□□□□□ -0.5
Sox3P53784 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.94□□□□□ -0.5
Sox3P53784 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sox3P53784 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox3P53784 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.94□□□□□ -0.5
Sox3P53784 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox3P53784 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox3P53784 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox3P53784 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox3P53784 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Gm26361-201ENSMUST00000158868 186 ntBASIC11.93□□□□□ -0.5
Sox3P53784 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.93□□□□□ -0.5
Sox3P53784 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.93□□□□□ -0.5
Sox3P53784 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Sox3P53784 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.93□□□□□ -0.5
Sox3P53784 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox3P53784 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox3P53784 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox3P53784 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Sox3P53784 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sox3P53784 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Sox3P53784 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.92□□□□□ -0.5
Sox3P53784 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox3P53784 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.92□□□□□ -0.5
Sox3P53784 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.92□□□□□ -0.5
Sox3P53784 Gm11597-201ENSMUST00000121423 964 ntBASIC11.92□□□□□ -0.5
Sox3P53784 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sox3P53784 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Gm8885-201ENSMUST00000189382 598 ntBASIC11.92□□□□□ -0.5
Sox3P53784 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.92□□□□□ -0.5
Sox3P53784 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox3P53784 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms