Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.72□□□□□ -0.37
ClgnP52194 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.72□□□□□ -0.37
ClgnP52194 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Gm27682-201ENSMUST00000183930 110 ntBASIC12.72□□□□□ -0.37
ClgnP52194 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.72□□□□□ -0.37
ClgnP52194 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.72□□□□□ -0.37
ClgnP52194 Gm43433-201ENSMUST00000196573 481 ntBASIC12.72□□□□□ -0.37
ClgnP52194 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.72□□□□□ -0.37
ClgnP52194 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.72□□□□□ -0.37
ClgnP52194 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.72□□□□□ -0.37
ClgnP52194 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ClgnP52194 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.72□□□□□ -0.37
ClgnP52194 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.72□□□□□ -0.37
ClgnP52194 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.72□□□□□ -0.37
ClgnP52194 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClgnP52194 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Gm13492-201ENSMUST00000119772 665 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.71□□□□□ -0.37
ClgnP52194 Gm16177-201ENSMUST00000120728 718 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.71□□□□□ -0.37
ClgnP52194 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.71□□□□□ -0.37
ClgnP52194 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Gm45784-201ENSMUST00000188360 142 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Gm24526-201ENSMUST00000082921 158 ntBASIC12.71□□□□□ -0.37
ClgnP52194 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ClgnP52194 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClgnP52194 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClgnP52194 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClgnP52194 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClgnP52194 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
ClgnP52194 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClgnP52194 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
ClgnP52194 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.71□□□□□ -0.38
ClgnP52194 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.71□□□□□ -0.38
ClgnP52194 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.71□□□□□ -0.38
ClgnP52194 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClgnP52194 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClgnP52194 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClgnP52194 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ClgnP52194 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.7□□□□□ -0.38
ClgnP52194 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.7□□□□□ -0.38
ClgnP52194 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.7□□□□□ -0.38
ClgnP52194 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ClgnP52194 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.7□□□□□ -0.38
ClgnP52194 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.7□□□□□ -0.38
ClgnP52194 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.7□□□□□ -0.38
ClgnP52194 Gm1335-201ENSMUST00000121653 386 ntBASIC12.7□□□□□ -0.38
ClgnP52194 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClgnP52194 Gm7029-201ENSMUST00000173226 450 ntBASIC12.7□□□□□ -0.38
ClgnP52194 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms