Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Gm14350-201ENSMUST00000116642 640 ntBASIC10.29□□□□□ -0.76
Nkx2-1P50220 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.29□□□□□ -0.76
Nkx2-1P50220 Gm27437-201ENSMUST00000183429 107 ntBASIC10.29□□□□□ -0.76
Nkx2-1P50220 Gm44069-201ENSMUST00000204898 506 ntBASIC10.29□□□□□ -0.76
Nkx2-1P50220 Gm44855-201ENSMUST00000205725 362 ntBASIC10.29□□□□□ -0.76
Nkx2-1P50220 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.29□□□□□ -0.76
Nkx2-1P50220 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.29□□□□□ -0.76
Nkx2-1P50220 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Gm14921-201ENSMUST00000118643 908 ntBASIC10.28□□□□□ -0.76
Nkx2-1P50220 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.28□□□□□ -0.76
Nkx2-1P50220 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.28□□□□□ -0.76
Nkx2-1P50220 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Gm6218-201ENSMUST00000219812 628 ntBASIC10.28□□□□□ -0.76
Nkx2-1P50220 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-1P50220 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-1P50220 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-1P50220 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.27□□□□□ -0.76
Nkx2-1P50220 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-1P50220 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.27□□□□□ -0.76
Nkx2-1P50220 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-1P50220 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-1P50220 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-1P50220 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-1P50220 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-1P50220 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms