Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Prox1P48437 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.95□□□□□ -0.5
Prox1P48437 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Prox1P48437 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Prox1P48437 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.94□□□□□ -0.5
Prox1P48437 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Prox1P48437 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.94□□□□□ -0.5
Prox1P48437 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.94□□□□□ -0.5
Prox1P48437 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Prox1P48437 Gm14127-201ENSMUST00000117906 678 ntBASIC11.94□□□□□ -0.5
Prox1P48437 Gm14928-201ENSMUST00000120198 477 ntBASIC11.94□□□□□ -0.5
Prox1P48437 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.94□□□□□ -0.5
Prox1P48437 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.94□□□□□ -0.5
Prox1P48437 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.94□□□□□ -0.5
Prox1P48437 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.94□□□□□ -0.5
Prox1P48437 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.94□□□□□ -0.5
Prox1P48437 Gm18187-201ENSMUST00000196476 984 ntBASIC11.94□□□□□ -0.5
Prox1P48437 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.94□□□□□ -0.5
Prox1P48437 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.94□□□□□ -0.5
Prox1P48437 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Prox1P48437 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Prox1P48437 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Prox1P48437 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Prox1P48437 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.93□□□□□ -0.5
Prox1P48437 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.93□□□□□ -0.5
Prox1P48437 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Prox1P48437 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Prox1P48437 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Gm6152-201ENSMUST00000151704 340 ntBASIC11.93□□□□□ -0.5
Prox1P48437 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Mir7654-201ENSMUST00000185082 70 ntBASIC11.93□□□□□ -0.5
Prox1P48437 Gm18018-201ENSMUST00000198273 408 ntBASIC11.93□□□□□ -0.5
Prox1P48437 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Prox1P48437 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.93□□□□□ -0.5
Prox1P48437 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Prox1P48437 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Prox1P48437 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Prox1P48437 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Prox1P48437 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.93□□□□□ -0.5
Prox1P48437 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Prox1P48437 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.93□□□□□ -0.5
Prox1P48437 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms