Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx2-6P43688 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Gm5070-201ENSMUST00000177599 862 ntBASIC11.77□□□□□ -0.53
Nkx2-6P43688 Mir6927-201ENSMUST00000184494 71 ntBASIC11.77□□□□□ -0.53
Nkx2-6P43688 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.77□□□□□ -0.53
Nkx2-6P43688 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.77□□□□□ -0.53
Nkx2-6P43688 Gm44262-201ENSMUST00000204969 372 ntBASIC11.77□□□□□ -0.53
Nkx2-6P43688 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.77□□□□□ -0.53
Nkx2-6P43688 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-6P43688 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.76□□□□□ -0.53
Nkx2-6P43688 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.76□□□□□ -0.53
Nkx2-6P43688 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Gm45433-201ENSMUST00000209386 247 ntBASIC11.76□□□□□ -0.53
Nkx2-6P43688 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.76□□□□□ -0.53
Nkx2-6P43688 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.76□□□□□ -0.53
Nkx2-6P43688 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx2-6P43688 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-6P43688 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Gm9083-201ENSMUST00000120423 819 ntBASIC11.75□□□□□ -0.53
Nkx2-6P43688 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.75□□□□□ -0.53
Nkx2-6P43688 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Mir3547-201ENSMUST00000175461 88 ntBASIC11.75□□□□□ -0.53
Nkx2-6P43688 Mir6979-201ENSMUST00000183927 56 ntBASIC11.75□□□□□ -0.53
Nkx2-6P43688 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.75□□□□□ -0.53
Nkx2-6P43688 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Gzmn-202ENSMUST00000225535 989 ntBASIC11.75□□□□□ -0.53
Nkx2-6P43688 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-6P43688 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms