Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.79□□□□□ -0.52
Cdx2P43241 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cdx2P43241 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.79□□□□□ -0.52
Cdx2P43241 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cdx2P43241 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Cdx2P43241 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.79□□□□□ -0.52
Cdx2P43241 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdx2P43241 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdx2P43241 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdx2P43241 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdx2P43241 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cdx2P43241 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Gm15881-201ENSMUST00000148792 942 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Gm8100-201ENSMUST00000182906 988 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 Gm10774-201ENSMUST00000188689 204 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Mir7686-201ENSMUST00000200604 57 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdx2P43241 Gm4157-201ENSMUST00000211647 679 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Gm10288-201ENSMUST00000084614 537 ntBASIC11.78□□□□□ -0.52
Cdx2P43241 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdx2P43241 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdx2P43241 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Cdx2P43241 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdx2P43241 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Cdx2P43241 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdx2P43241 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdx2P43241 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Cdx2P43241 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdx2P43241 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdx2P43241 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdx2P43241 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.77□□□□□ -0.52
Cdx2P43241 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdx2P43241 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdx2P43241 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdx2P43241 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms